Gene: Cre12.g498500

Overview

Common name:	DEG1C,DEG11
Defline:	(1 of 1) PF00089//PF13180 - Trypsin (Trypsin) // PDZ domain (PDZ_2); Deg protease
Description:	DegP-type protease, in the stroma and at the stromal side of the thylakoid lumen; one PDZ domain; similar to At DegP1; plays a role as effector in the chloroplast unfolded protein response
Synonyms:	DEG1C,DEG11,g12615.t1,Cre12.g498500.t1.1
Chromosome:	chromosome 12

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

Bait ID	Bait Name	Prey ID	Prey Name	Reference
Cre08.g362900	PSBP4	Cre12.g498500	DEG1C,DEG11	Mackinder et al. 2017
Cre12.g509050	PPL1,PSBP3	Cre12.g498500	DEG1C,DEG11	Mackinder et al. 2017

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.000078_1	CLIP2.000078	CDS	80	6.1
CLIP2.000078_2	CLIP2.000078	CDS	80	6.1
CLIP2.000133_1	CLIP2.000133	5'UTR	80	6.1
CLIP2.000133_2	CLIP2.000133	5'UTR	80	6.1
CLIP2.000241_3	CLIP2.000241	intron	80	6.1
CLIP2.000772_1	CLIP2.000772	intron	80	6.1
CLIP2.000772_2	CLIP2.000772	intron	80	6.1
CLIP2.000853_1	CLIP2.000853	5'UTR	80	6.1
CLIP2.000859_2	CLIP2.000859	5'UTR	80	6.1
CLIP2.000864_2	CLIP2.000864	5'UTR	63	6.1
CLIP2.000886_1	CLIP2.000886	intron	80	6.1
CLIP2.000886_2	CLIP2.000886	intron	80	6.1
CLIP2.000904_1	CLIP2.000904	intron	80	6.1
CLIP2.000973_1	CLIP2.000973	CDS	80	6.1
CLIP2.000973_2	CLIP2.000973	CDS	80	6.1
CLIP2.056953_1	CLIP2.056953	3'UTR	80	6.1
CLIP2.056953_2	CLIP2.056953	3'UTR	80	6.1
CLIP2.073055_1	CLIP2.073055	3'UTR	80	6.1
LMJ.RY0402.124047_1	LMJ.RY0402.124047	3'UTR	95	5.5
LMJ.RY0402.124047_2	LMJ.RY0402.124047	3'UTR	95	5.5
LMJ.RY0402.139586_1	LMJ.RY0402.139586	intron	95	5.5
LMJ.RY0402.139586_2	LMJ.RY0402.139586	intron	95	5.5
LMJ.RY0402.217624_1	LMJ.RY0402.217624	CDS	73	5.5
LMJ.RY0402.218467_1	LMJ.RY0402.218467	5'UTR	95	5.5
LMJ.RY0402.218467_2	LMJ.RY0402.218467	5'UTR	95	5.5
LMJ.RY0402.224463_3	LMJ.RY0402.224463	intron	73	5.5
LMJ.RY0402.241684_1	LMJ.RY0402.241684	3'UTR	73	5.5
LMJ.SG0182.003514_1	LMJ.SG0182.003514	5'UTR	75	5.3

Gene Annotations

PFAM:	PF00089, PF13180
PANTHER:	PTHR22939 PTHR22939:SF81
KEGG_ec:	EC:3.4.21.107
KEGG_orthology:
KOG:	KOG1320
Gene ontology terms::	GO:0004252, GO:0005515, GO:0006508
Best arabidopsis TAIR name:	AT3G27925.1
Best arabidopsis TAIR symbol:	Deg1,DEGP1
Best arabidopsis TAIR defline:	DegP protease 1
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.