Insertion junction: CLIP2.000973_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000973
Chromosome:chromosome 12
Location:3345782
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498500 DEG1C,DEG11 (1 of 1) PF00089//PF13180 - Trypsin (Trypsin) // PDZ domain (PDZ_2); Deg protease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCGACACGCCATGCGGTAGCAGCACTGGTGCACATTGATCCGAAGGT
Internal bar code:TGATTTGTTTGTGTATTCATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5013
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAGCTTGTGTGCAATGCA
Suggested primer 2:GCTGAGCTCGCCTAGGTTAG