Insertion junction: LMJ.RY0402.224463_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.224463
Chromosome:chromosome 12
Location:3247109
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g498500 DEG1C,DEG11 (1 of 1) PF00089//PF13180 - Trypsin (Trypsin) // PDZ domain (PDZ_2); Deg protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGAACAGCCCCCTGTGTAGTGGTATCGC
Internal bar code:GCGAAAGTACGGTGAGGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:378
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CCTAGATTTGCTGCGTGTCA
Suggested primer 2:ATGTTTCTCCCCAAGCCTCT