Insertion junction: CLIP2.056953_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056953
Chromosome:chromosome 12
Location:3346024
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498450 (1 of 1) K11493 - regulator of chromosome condensation (RCC1) 3'UTR
Cre12.g498500 DEG1C,DEG11 (1 of 1) PF00089//PF13180 - Trypsin (Trypsin) // PDZ domain (PDZ_2); Deg protease 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGAATTGGCTCTCCTCTGTAATAACGGCTATTCAGATTGCCTTAATGC
Internal bar code:GGTCTTTGGTAGTTCCGAAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1121
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TGAACTGCAGGCTGATGAGG
Suggested primer 2:CGTAAGGCTCATTGAAGCGC