Insertion junction: LMJ.RY0402.218467_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.218467
Chromosome:chromosome 12
Location:3243829
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g498500 DEG1C,DEG11 (1 of 1) PF00089//PF13180 - Trypsin (Trypsin) // PDZ domain (PDZ_2); Deg protease 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTCTGAGCGCACACTGACACTGCTTAAT
Internal bar code:TCTGAGCGAGGTGCTGATATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:325
LEAP-Seq percent confirming:99.6128
LEAP-Seq n confirming:3602
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAGGAGAAAGGACGGGTT
Suggested primer 2:GAGGGTCAGTAGCGACAAGC