Insertion junction: LMJ.RY0402.139586_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.139586
Chromosome:chromosome 12
Location:3247141
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g498500 DEG1C,DEG11 (1 of 1) PF00089//PF13180 - Trypsin (Trypsin) // PDZ domain (PDZ_2); Deg protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGATACCACTACACAGGGGGCTGTTCC
Internal bar code:CGTAGCGTAGAGATCCCATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:590
LEAP-Seq percent confirming:98.3129
LEAP-Seq n confirming:5128
LEAP-Seq n nonconfirming:88
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CCTAGATTTGCTGCGTGTCA
Suggested primer 2:ATGTTTCTCCCCAAGCCTCT