Insertion junction: CLIP2.000904_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000904
Chromosome:chromosome 12
Location:3343180
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498500 DEG1C,DEG11 (1 of 1) PF00089//PF13180 - Trypsin (Trypsin) // PDZ domain (PDZ_2); Deg protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTATGACCGGTAGCCAACCAAAACGCGTCGCAATCGTCGCGTTGTGGG
Internal bar code:GGTTTGTCTATTTGCGGGCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1905
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CATCGCATGGCTGTTAGTGC
Suggested primer 2:GGTAGTCGCATAGCTCGCTT