Insertion junction: LMJ.RY0402.241684_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.241684
Chromosome:chromosome 12
Location:3247426
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g498500 DEG1C,DEG11 (1 of 1) PF00089//PF13180 - Trypsin (Trypsin) // PDZ domain (PDZ_2); Deg protease 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACCAGTGCTGCTACCGCATGGCGTGTCG
Internal bar code:AGGCCACGAGATTCGGTATCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:597
LEAP-Seq percent confirming:98.8938
LEAP-Seq n confirming:894
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCTAGATTTGCTGCGTGTCA
Suggested primer 2:ATGTTTCTCCCCAAGCCTCT