Insertion junction: LMJ.RY0402.124047_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.124047
Chromosome:chromosome 12
Location:3247599
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g498500 DEG1C,DEG11 (1 of 1) PF00089//PF13180 - Trypsin (Trypsin) // PDZ domain (PDZ_2); Deg protease 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATTGCCTTAATGCAGCCATCCCAGTACG
Internal bar code:CGGGGCGGTGGTAGTTAATAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1044
LEAP-Seq percent confirming:99.6697
LEAP-Seq n confirming:2414
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCTAGATTTGCTGCGTGTCA
Suggested primer 2:ATGTTTCTCCCCAAGCCTCT