Insertion junction: LMJ.RY0402.139586_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.139586
Chromosome:chromosome 12
Location:3247135
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g498500 DEG1C,DEG11 (1 of 1) PF00089//PF13180 - Trypsin (Trypsin) // PDZ domain (PDZ_2); Deg protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCTTCAAGCCAATAAAGCTGGTGCCTG
Internal bar code:GAAGGCCAGGCCGCCGCGACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:939
LEAP-Seq percent confirming:99.7354
LEAP-Seq n confirming:7916
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTTTCTCCCCAAGCCTCT
Suggested primer 2:CCTAGATTTGCTGCGTGTCA