Insertion junction: CLIP2.000790_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000790
Chromosome:chromosome 3
Location:5010601
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179800 LCI24 Low-CO2-inducible membrane protein; (1 of 5) PF07466 - Protein of unknown function (DUF1517) (DUF1517) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACTCGCTGGTGCGTTGCATGGGCGACCGACCTGAGCCCCCTATTAAAC
Internal bar code:GGTCGGTGATGCGCCGAGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2561
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGTGCCAAGTTCAAACAG
Suggested primer 2:CGTTCTTGTGCTTGTGTGCA