Insertion junction: CLIP2.000830_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000830
Chromosome:chromosome 8
Location:1688633
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g366101 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAACTACGGTATACCGGCGGCGGCGCCGGTAGGTCAAGTCCTGAGATTC
Internal bar code:AGCTATATGCCACTCACGGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2649
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTACGACCAACACGTGA
Suggested primer 2:CTTTGCGAGGATCTGAGCCA