Insertion junction: CLIP2.000881_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000881
Chromosome:chromosome 12
Location:4734410
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g522950 MIND1 Chloroplast septum site-determining protein; (1 of 1) K03609 - septum site-determining protein MinD (minD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCTCCTGCTTTGCACGGATTTGGGCATTTGGTAAGGCCTGTCGGTCTG
Internal bar code:AGGACAGTCGGGCGGAAGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:5140
LEAP-Seq percent confirming:96.6942
LEAP-Seq n confirming:117
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:121

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTGACGTCGGCTTCATC
Suggested primer 2:CTCCGCCCCTGCTATAACTG