Insertion junction: CLIP2.000921_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000921
Chromosome:chromosome 1
Location:4200824
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g028350 DEG8 (1 of 2) PTHR22939:SF99 - PROTEASE DO-LIKE 8, CHLOROPLASTIC; Deg protease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGTCCACCTCGGGATTGGCAGCGGCACGCCCCTGTGCGGGCATGCATG
Internal bar code:TATAGCTGTATATTACGTGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:962
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTGGTGGACTTGCTACTG
Suggested primer 2:CACAATGGCACCACACAAGG