Gene: Cre01.g028350
Overview
| Common name: | DEG8 |
| Defline: | (1 of 2) PTHR22939:SF99 - PROTEASE DO-LIKE 8, CHLOROPLASTIC; Deg protease |
| Description: | DegP-type protease, thylakoid lumen; one PDZ domain |
| Synonyms: | g647.t1 |
| Chromosome: | chromosome 1 |
Protein Localization
A plasmid for expressing Cre01.g028350 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre01.g028350-Venus-3xFLAG
Imaged strain: CSI_LW08C7
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/pyrenoid/pyrenoid traversing enriched
chloroplast/homogeneous
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
| Bait ID | Bait Name | Prey ID | Prey Name | Reference |
|---|---|---|---|---|
| Cre01.g028350 | DEG8 | Cre01.g028350 | DEG8 | Wang et al. 2023 |
| Cre01.g028350 | DEG8 | Cre02.g110600 | DEG5 | Wang et al. 2023 |
| Cre01.g028350 | DEG8 | Cre06.g273700 | HCF136 | Wang et al. 2023 |
| Cre01.g028350 | DEG8 | Cre06.g279700 | Wang et al. 2023 | |
| Cre01.g028350 | DEG8 | Cre07.g334900 | Wang et al. 2023 |
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.000285_1 | CLIP2.000285 | intron | 80 | 6.1 |
| CLIP2.000285_2 | CLIP2.000285 | intron | 80 | 6.1 |
| CLIP2.000481_1 | CLIP2.000481 | intron | 80 | 6.1 |
| CLIP2.000481_2 | CLIP2.000481 | intron | 80 | 6.1 |
| CLIP2.000824_1 | CLIP2.000824 | intron | 80 | 6.1 |
| CLIP2.000824_2 | CLIP2.000824 | intron | 80 | 6.1 |
| CLIP2.000921_1 | CLIP2.000921 | CDS | 80 | 6.1 |
| CLIP2.000921_2 | CLIP2.000921 | CDS | 80 | 6.1 |
| CLIP2.001068_1 | CLIP2.001068 | intron | 80 | 6.1 |
| CLIP2.001068_2 | CLIP2.001068 | intron | 80 | 6.1 |
| LMJ.RY0402.039776_1 | LMJ.RY0402.039776 | intron | 95 | 5.5 |
| LMJ.RY0402.039776_2 | LMJ.RY0402.039776 | intron | 95 | 5.5 |
| LMJ.RY0402.080357_1 | LMJ.RY0402.080357 | intron | 73 | 5.5 |
| LMJ.RY0402.184918_1 | LMJ.RY0402.184918 | intron | 73 | 5.5 |
| LMJ.RY0402.204271_1 | LMJ.RY0402.204271 | intron | 73 | 5.5 |
| LMJ.RY0402.217364_1 | LMJ.RY0402.217364 | intron | 58 | 5.5 |
| LMJ.RY0402.217364_2 | LMJ.RY0402.217364 | intron | 58 | 5.5 |
| LMJ.RY0402.218367_1 | LMJ.RY0402.218367 | CDS | 95 | 5.5 |
| LMJ.RY0402.218367_2 | LMJ.RY0402.218367 | CDS | 95 | 5.5 |
Gene Annotations
| PFAM: | PF13180, PF13365 |
| PANTHER: | PTHR22939 PTHR22939:SF99 |
| KEGG_ec: | EC:3.4.21.107 |
| KEGG_orthology: | K01362 |
| KOG: | KOG1320 |
| Gene ontology terms:: | GO:0004252, GO:0005515, GO:0006508 |
| Best arabidopsis TAIR name: | AT5G39830 |
| Best arabidopsis TAIR symbol: | DEG8,DEGP8 |
| Best arabidopsis TAIR defline: | Trypsin family protein with PDZ domain |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.