Insertion junction: CLIP2.000921_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000921
Chromosome:chromosome 1
Location:4200825
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g028350 DEG8 (1 of 2) PTHR22939:SF99 - PROTEASE DO-LIKE 8, CHLOROPLASTIC; Deg protease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAGGGCAATGGCACCGGTGAGGACTGAGGGGGCAGGCGGGCTCCGTAG
Internal bar code:TATAGCTGTATATTACGTGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:707
LEAP-Seq percent confirming:15.1515
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CACAATGGCACCACACAAGG
Suggested primer 2:ACGTGGTGGACTTGCTACTG