Insertion junction: LMJ.RY0402.184918_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.184918
Chromosome:chromosome 1
Location:4234888
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g028350 DEG8 (1 of 2) PTHR22939:SF99 - PROTEASE DO-LIKE 8, CHLOROPLASTIC; Deg protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGATGAGGGTGATTACACGCGAGGAAAG
Internal bar code:CGAGTGCGGTGCTCAGCAGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:943
LEAP-Seq percent confirming:96.8476
LEAP-Seq n confirming:553
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GACCTACGGACCACGAACAT
Suggested primer 2:CAACCCTAAATCCAAGCCAA