Insertion junction: LMJ.RY0402.039776_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.039776
Chromosome:chromosome 1
Location:4236313
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g028350 DEG8 (1 of 2) PTHR22939:SF99 - PROTEASE DO-LIKE 8, CHLOROPLASTIC; Deg protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATCACCGCCGTCGATTGACTCCCTGTCG
Internal bar code:CGGGTGGAGATCCTCCCGCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAGATGAGGGGTGTTACG
Suggested primer 2:CACGTGCATATGTACCCTGC