Insertion junction: LMJ.RY0402.218367_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.218367
Chromosome:chromosome 1
Location:4231706
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g028350 DEG8 (1 of 2) PTHR22939:SF99 - PROTEASE DO-LIKE 8, CHLOROPLASTIC; Deg protease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAGCGAGTTTGGGGTCTATTCGCTACA
Internal bar code:GAGTGCGGCCATGCTGTCCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:563
LEAP-Seq percent confirming:98.5658
LEAP-Seq n confirming:1993
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCCCAATCACGTATGCTT
Suggested primer 2:ACGGTTCAGGTTTGTTCCTG