Insertion junction: LMJ.RY0402.080357_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.080357
Chromosome:chromosome 1
Location:4235398
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g028350 DEG8 (1 of 2) PTHR22939:SF99 - PROTEASE DO-LIKE 8, CHLOROPLASTIC; Deg protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGCACGCACATATGCACGCACGCACGC
Internal bar code:ATATTTGGCTATCCAGCCCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:313
LEAP-Seq percent confirming:99.6454
LEAP-Seq n confirming:281
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTATACACGCTTCCGTC
Suggested primer 2:ACCTGGTCTGTGGACCTCAC