Insertion junction: CLIP2.001012_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001012
Chromosome:chromosome 4
Location:3731039
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g229300 RCA1 (1 of 4) IPR003959//IPR027417 - ATPase, AAA-type, core // P-loop containing nucleoside triphosphate hydrolase; RuBisCO activase 1, chloroplastic CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGGGCCGCATGTGCTCGCTGTTCATCAACGATCTGGACGCCGGTGCCG
Internal bar code:TGCTCGCGTGTTATTTGATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:339
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGTTCTACTCCCGCTTAT
Suggested primer 2:CCCGCTTTCCTGGACAAGAT