Insertion junction: CLIP2.001076_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001076
Chromosome:chromosome 7
Location:2122112
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g326450 VPS5B (1 of 2) K17917 - sorting nexin-1/2 (SNX1_2); Subunit of Retromer complex 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCGTCACAGCGCCGCAGATTTGCTTGCTCGCTCCCATCATGCACGCGC
Internal bar code:TGTGACACTAGCTTGTTTACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1286
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTGTGAAGTAGCAGCCA
Suggested primer 2:AGCCGTGAATCAGTGAGCAA