Insertion junction: CLIP2.001083_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001083
Chromosome:chromosome 3
Location:1915291
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155001 ISA1,STA7 (1 of 1) PTHR10357:SF169 - ISOAMYLASE 1, CHLOROPLASTIC; Isoamylase, starch debranching enzyme 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTGAATACCTACCCCCTTCCCCCCGACCCCACCTGGTTGAGTCCGTCG
Internal bar code:ATGCAACCGCTGTTGAGTCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:490
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGCGAGGTGGAAAGGGAG
Suggested primer 2:CGCTCACAGTCCTGTCACAT