Insertion junction: CLIP2.001100_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.001100
Chromosome:chromosome 7
Location:4831514
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g346050 CRD1,CHL27A Copper response defect 1 protein; (1 of 2) 1.14.13.81 - Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase / Mg-protoporphyrin IX monomethyl ester oxidative cyclase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGAGACCATGCGCGATGGCATCAAGGTGGCTGCCAAGGAGACCCTGCT
Internal bar code:AGTGTCCAATAGCAGGCAAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:813
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGTCTGTAGGGGAGGGA
Suggested primer 2:TGGTTGCTGATTGGCTTTGC