Insertion junction: CLIP2.001101_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001101
Chromosome:chromosome 6
Location:4957277
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g281250 CFA1 Cyclopropane fatty acid synthase; (1 of 1) 2.1.1.79 - Cyclopropane-fatty-acyl-phospholipid synthase / Unsaturated-phospholipid methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATGGCTGCGGTTGAAGACGCGTGGAACACTTGGTGAGCATGCCGCAG
Internal bar code:CTGCGGCGCGGTGCTCGTCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:921
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCAGCCAGGAAGAAGTAG
Suggested primer 2:GGTGGTGAGCGTTGAGATGA