Insertion junction: CLIP2.001118_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001118
Chromosome:chromosome 16
Location:2663570
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661550 (1 of 1) PF06941 - 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) (NT5C) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCCACGCCACATTGGCCAGGATGCACCCTGCAAGTTGGTGAGGGCCG
Internal bar code:AGTTGTTTGGTGCATTGGGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1879
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCCATCACACATCCACGT
Suggested primer 2:TTGTGCCACTCTCCGTTCTC