Gene: Cre16.g661550
Overview
| Common name: | |
| Defline: | (1 of 1) PF06941 - 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) (NT5C) |
| Description: | |
| Synonyms: | Cre16.g661550.t1.1,g15974.t1 |
| Chromosome: | chromosome 16 |
Protein Localization
A plasmid for expressing Cre16.g661550 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre16.g661550-Venus-3xFLAG
Imaged strain: CSI_LW07F11
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001118_1 | CLIP2.001118 | 3'UTR | 80 | 6.1 |
| CLIP2.001118_2 | CLIP2.001118 | 3'UTR | 80 | 6.1 |
| CLIP2.001812_1 | CLIP2.001812 | CDS | 80 | 6.1 |
| CLIP2.002390_1 | CLIP2.002390 | CDS | 80 | 6.1 |
| CLIP2.002390_2 | CLIP2.002390 | CDS | 80 | 6.1 |
| CLIP2.003324_1 | CLIP2.003324 | 3'UTR | 80 | 6.1 |
| CLIP2.003324_2 | CLIP2.003324 | 3'UTR | 80 | 6.1 |
| CLIP2.006108_1 | CLIP2.006108 | 5'UTR | 80 | 6.1 |
| CLIP2.006108_2 | CLIP2.006108 | 5'UTR | 80 | 6.1 |
| CLIP2.006894_1 | CLIP2.006894 | 3'UTR | 80 | 6.1 |
| CLIP2.006894_2 | CLIP2.006894 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.147690_3 | LMJ.RY0402.147690 | 3'UTR | 58 | 5.5 |
| LMJ.RY0402.226579_1 | LMJ.RY0402.226579 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.227224_1 | LMJ.RY0402.227224 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.227224_2 | LMJ.RY0402.227224 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.228768_2 | LMJ.RY0402.228768 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.252572_1 | LMJ.RY0402.252572 | 3'UTR | 73 | 5.5 |
Gene Annotations
| PFAM: | PF06941 |
| PANTHER: | PTHR35134 PTHR35134:SF2 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | GO:0008253, GO:0009264 |
| Best arabidopsis TAIR name: | AT4G33140 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.