Insertion junction: CLIP2.002390_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.002390
Chromosome:chromosome 16
Location:2666845
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661550 (1 of 1) PF06941 - 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) (NT5C) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCTTTGTCACTGAGTCGGCGACACACGCCCAGCATTCGCGCGTGGAG
Internal bar code:TTGAAGTTACGGTCCGTAAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1197
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTCAATGTTGTGTGCGT
Suggested primer 2:CGTCCAGTCCATACGAGTCG