Insertion junction: CLIP2.001139_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001139
Chromosome:chromosome 13
Location:2301470
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g578750 TBA1 (1 of 1) K00207 - dihydropyrimidine dehydrogenase (NADP+) (DPYD); Translation factor for chloroplast psbA mRNA CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAAGGCTTTCGACGAGGGCTGGGGTGGCGTCATCTGCAAGGCAAGTCCG
Internal bar code:GCTGGTCAAAGGGTTCCCATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:667
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTAGTCGCGGATCTTGG
Suggested primer 2:ACGCTCTTTCTCGCACTCAA