| Common name: | TBA1 |
| Defline: | (1 of 1) K00207 - dihydropyrimidine dehydrogenase (NADP+) (DPYD); Translation factor for chloroplast psbA mRNA |
| Description: | Translation factor for chloroplast-encoded psbA gene; mutant has defect in translation of D1, PSII reaction center protein; chloroplast targeted; related to dehydrogenases |
| Synonyms: | g14218.t1,Cre13.g578750.t1.1,TBA1 |
| Chromosome: | chromosome 13 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001139_1 | CLIP2.001139 | CDS | 80 | 6.1 |
| CLIP2.001139_2 | CLIP2.001139 | CDS | 80 | 6.1 |
| CLIP2.002723_1 | CLIP2.002723 | CDS | 80 | 6.1 |
| CLIP2.002723_2 | CLIP2.002723 | CDS | 80 | 6.1 |
| CLIP2.004513_1 | CLIP2.004513 | intron | 80 | 6.1 |
| CLIP2.004513_2 | CLIP2.004513 | intron | 80 | 6.1 |
| CLIP2.006604_1 | CLIP2.006604 | CDS | 80 | 6.1 |
| CLIP2.006604_2 | CLIP2.006604 | CDS | 80 | 6.1 |
| CLIP2.007129_1 | CLIP2.007129 | intron | 80 | 6.1 |
| CLIP2.007129_2 | CLIP2.007129 | intron | 80 | 6.1 |
| LMJ.RY0402.038594_2 | LMJ.RY0402.038594 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.039056_2 | LMJ.RY0402.039056 | intron | 73 | 5.5 |
| LMJ.RY0402.052322_1 | LMJ.RY0402.052322 | intron | 95 | 5.5 |
| LMJ.RY0402.052322_2 | LMJ.RY0402.052322 | intron | 95 | 5.5 |
| LMJ.RY0402.072939_1 | LMJ.RY0402.072939 | intron | 58 | 5.5 |
| LMJ.RY0402.089463_1 | LMJ.RY0402.089463 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.160053_1 | LMJ.RY0402.160053 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.160053_2 | LMJ.RY0402.160053 | CDS | 95 | 5.5 |
| LMJ.RY0402.171104_1 | LMJ.RY0402.171104 | 3'UTR | 73 | 5.5 |
| PFAM: | PF01180 |
| PANTHER: | PTHR11938 PTHR11938:SF87 |
| KEGG_ec: | 1.3.1.2 |
| KEGG_orthology: | K00207 |
| KOG: | KOG1799 |
| Gene ontology terms:: | GO:0005737, GO:0016627, GO:0055114 |
| Best arabidopsis TAIR name: | AT3G17810 |
| Best arabidopsis TAIR symbol: | PYD1 |
| Best arabidopsis TAIR defline: | pyrimidine 1 |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.