Insertion junction: LMJ.RY0402.171104_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.171104
Chromosome:chromosome 13
Location:2254444
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g578750 TBA1 (1 of 1) K00207 - dihydropyrimidine dehydrogenase (NADP+) (DPYD); Translation factor for chloroplast psbA mRNA 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCAGGGGAGCTCTCTAACTCCCCTGCTC
Internal bar code:TTCAAACGAGGGCGCAGGGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:998
LEAP-Seq percent confirming:98.0728
LEAP-Seq n confirming:1374
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GTTAAGAACGCCGACAGCAT
Suggested primer 2:TAGGCGATGCATTCATGTGT