Insertion junction: CLIP2.006604_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.006604
Chromosome:chromosome 13
Location:2301466
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g578750 TBA1 (1 of 1) K00207 - dihydropyrimidine dehydrogenase (NADP+) (DPYD); Translation factor for chloroplast psbA mRNA CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTTTCGACGAGGGCTGGGGTGGCGTCATCTGCAAGGCAAGTCCGGTAG
Internal bar code:TTACCGGATCCCCATAGCTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:51
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTAGTCGCGGATCTTGG
Suggested primer 2:ACGCTCTTTCTCGCACTCAA