Insertion junction: CLIP2.004513_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004513
Chromosome:chromosome 13
Location:2301417
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g578750 TBA1 (1 of 1) K00207 - dihydropyrimidine dehydrogenase (NADP+) (DPYD); Translation factor for chloroplast psbA mRNA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGACCCCCCCCCCCCCCACACACACACACCACCACCACCACCACCACCA
Internal bar code:TTTAAGGAATCCAACTCCCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:399
LEAP-Seq percent confirming:38.0952
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTAGTCGCGGATCTTGG
Suggested primer 2:ACGCTCTTTCTCGCACTCAA