Insertion junction: CLIP2.001150_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001150
Chromosome:chromosome 7
Location:2454395
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g329150 SPL21,SPLH1 DEAH-box helicase, possible nuclear pre-mRNA splicing factor, N-terminal; (1 of 3) K12818 - ATP-dependent RNA helicase DHX8/PRP22 (DHX8, PRP22) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCCCTCCACCCGCTACCTTGCTTGCTCCCAGGACTGCCCATCCACCC
Internal bar code:CGTTCGAATCGGGGTTGCGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2653
LEAP-Seq percent confirming:6.25
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:90
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGTGTAGAGGCGTGTGA
Suggested primer 2:ACATTCATACATGCACGCGC