Insertion junction: CLIP2.001167_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001167
Chromosome:chromosome 1
Location:3849513
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g025250 RFK2 Riboflavin kinase; (1 of 1) PTHR22749//PTHR22749:SF2 - RIBOFLAVIN KINASE/FMN ADENYLYLTRANSFERASE // RIBOFLAVIN KINASE 5'UTR
Cre01.g025300 RAD51B (1 of 1) K10869 - RAD51-like protein 1 (RAD51L1, RAD51B); DNA recombination protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTTGGTTTTGCATGTTTAAAGGCTCTCAGCATGCAGTGTTGTTGCTAA
Internal bar code:TACTATTAAACGCAGACTGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1011
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TAGAGATGACTCCACCGGCA
Suggested primer 2:CTGTGACCGAGTAGAGGGGA