Gene: Cre01.g025300

Overview

Common name:	RAD51B
Defline:	(1 of 1) K10869 - RAD51-like protein 1 (RAD51L1, RAD51B); DNA recombination protein
Description:	similar to RAD51 which forms nucleoprotein filament for strand invasion; homologous to RecA ATPase
Synonyms:	RAD51B,g581.t1
Chromosome:	chromosome 1

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.001167_1	CLIP2.001167	3'UTR	80	6.1
CLIP2.001167_2	CLIP2.001167	3'UTR	80	6.1
CLIP2.029349_1	CLIP2.029349	intron	80	6.1
CLIP2.029349_2	CLIP2.029349	intron	80	6.1
CLIP2.035538_1	CLIP2.035538	intron	80	6.1
CLIP2.037569_1	CLIP2.037569	intron	80	6.1
CLIP2.041319_1	CLIP2.041319	intron	80	6.1
CLIP2.045489_1	CLIP2.045489	intron	80	6.1
CLIP2.058459_1	CLIP2.058459	5'UTR	80	6.1
CLIP2.058459_2	CLIP2.058459	5'UTR	80	6.1
CLIP2.058640_1	CLIP2.058640	5'UTR	80	6.1
CLIP2.058640_2	CLIP2.058640	5'UTR	80	6.1
CLIP2.059163_1	CLIP2.059163	5'UTR	80	6.1
CLIP2.059163_2	CLIP2.059163	5'UTR	80	6.1
CLIP2.068583_1	CLIP2.068583	5'UTR	80	6.1
CLIP2.068583_2	CLIP2.068583	5'UTR	80	6.1
LMJ.RY0402.053586_1	LMJ.RY0402.053586	intron	95	5.5
LMJ.RY0402.053586_2	LMJ.RY0402.053586	intron	95	5.5
LMJ.RY0402.055337_1	LMJ.RY0402.055337	CDS	73	5.5
LMJ.RY0402.063216_1	LMJ.RY0402.063216	CDS	95	5.5
LMJ.RY0402.063216_2	LMJ.RY0402.063216	intron	95	5.5
LMJ.RY0402.123729_1	LMJ.RY0402.123729	3'UTR	95	5.5
LMJ.RY0402.123729_2	LMJ.RY0402.123729	3'UTR	95	5.5
LMJ.RY0402.150893_1	LMJ.RY0402.150893	intron	95	5.5
LMJ.RY0402.150893_2	LMJ.RY0402.150893	intron	95	5.5
LMJ.RY0402.185495_1	LMJ.RY0402.185495	intron	58	5.5

Gene Annotations

PFAM:	PF08423
PANTHER:	PTHR22942 PTHR22942:SF15
KEGG_ec:	EC:3.6.1.8
KEGG_orthology:	K10869
KOG:	KOG1564
Gene ontology terms::	GO:0000724, GO:0003677, GO:0005524, GO:0006281, GO:0008094, GO:0033063
Best arabidopsis TAIR name:	AT2G28560
Best arabidopsis TAIR symbol:	ATRAD51B,RAD51B
Best arabidopsis TAIR defline:	DNA repair (Rad51) family protein
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Cisplatin, screen 1 of 4 ( 99% confidence (FDR = 0.0054))

Cisplatin, screen 2 of 4 ( 99% confidence (FDR = 0.0035))

Cisplatin, screen 3 of 4 ( 99% confidence (FDR = 2.5e-06))

Cisplatin, screen 4 of 4 ( 99% confidence (FDR = 0.001))

Flagella, screen 3 of 6 ( 96% confidence (FDR = 0.034))

Methyl methanesulfonate, screen 1 of 4 ( 81% confidence (FDR = 0.19))

Methyl methanesulfonate, screen 3 of 4 ( 95% confidence (FDR = 0.05))

Methyl methanesulfonate, screen 4 of 4 ( 99% confidence (FDR = 0.0079))

Zeocin, screen 3 of 5 ( 79% confidence (FDR = 0.21))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.