Insertion junction: CLIP2.001180_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001180
Chromosome:chromosome 12
Location:456393
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g494750 PRPS20 Chloroplast ribosomal protein S20; (1 of 1) K02968 - small subunit ribosomal protein S20 (RP-S20, rpsT) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGTCAGGAGAGGCGTGGTTAGGCAGCCGGAGTAGAGACAGTGGCAGT
Internal bar code:AGAACATTAGTTCGGTACGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:5775
LEAP-Seq percent confirming:99.0909
LEAP-Seq n confirming:109
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:110

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGATAGGGGTGTTCGATG
Suggested primer 2:AAGAAGAAGATGCCCAGCCC