Gene: Cre12.g494750
Overview
| Common name: | PRPS20 |
| Defline: | Chloroplast ribosomal protein S20; (1 of 1) K02968 - small subunit ribosomal protein S20 (RP-S20, rpsT) |
| Description: | imported to chloroplast; Chloroplast small ribosomal subunit protein S20; component psaA trans-splicing sub complex II |
| Synonyms: | g12116.t1,Cre12.g494750.t1.1 |
| Chromosome: | chromosome 12 |
Protein Localization
A plasmid for expressing Cre12.g494750 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g494750-Venus-3xFLAG
Imaged strain: CSI_LW03A5
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/not homogeneous/pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001180_1 | CLIP2.001180 | 3'UTR | 80 | 6.1 |
| CLIP2.001180_2 | CLIP2.001180 | 3'UTR | 80 | 6.1 |
| CLIP2.005432_1 | CLIP2.005432 | 5'UTR | 80 | 6.1 |
| CLIP2.005432_2 | CLIP2.005432 | 5'UTR | 80 | 6.1 |
| CLIP2.006643_1 | CLIP2.006643 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.065450_1 | LMJ.RY0402.065450 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.129336_1 | LMJ.RY0402.129336 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.148934_1 | LMJ.RY0402.148934 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.148934_2 | LMJ.RY0402.148934 | 3'UTR | 95 | 5.5 |
Gene Annotations
| PFAM: | PF01649 |
| PANTHER: | PTHR33398 PTHR33398:SF2 |
| KEGG_ec: | |
| KEGG_orthology: | K02968 |
| KOG: | |
| Gene ontology terms:: | GO:0003723, GO:0003735, GO:0005622, GO:0005840, GO:0006412 |
| Best arabidopsis TAIR name: | AT3G15190 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | chloroplast 30S ribosomal protein S20, putative |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.