Insertion junction: CLIP2.005432_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005432
Chromosome:chromosome 12
Location:457490
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g494750 PRPS20 Chloroplast ribosomal protein S20; (1 of 1) K02968 - small subunit ribosomal protein S20 (RP-S20, rpsT) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGGGGTGCGACCGGCCTAGACTTCTCAGAGGATGGAAGCACGTCCCA
Internal bar code:GGTATTAAGATGTATTGCATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2265
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCTTAGCGCTAGCCCTC
Suggested primer 2:GGGCTGGGCATCTTCTTCTT