Insertion junction: LMJ.RY0402.148934_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.148934
Chromosome:chromosome 12
Location:695095
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g494750 PRPS20 Chloroplast ribosomal protein S20; (1 of 1) K02968 - small subunit ribosomal protein S20 (RP-S20, rpsT) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAGGTTGCGTATGCGTTCTGCTCACGCT
Internal bar code:TGAGTTACTATTCACATTCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:331
LEAP-Seq percent confirming:99.6391
LEAP-Seq n confirming:2485
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGGCTGCGAAAGTGTATG
Suggested primer 2:CGCGTCTATAACAAGTCGCA