Insertion junction: CLIP2.001189_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001189
Chromosome:chromosome 3
Location:4707646
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g177450 (1 of 1) IPR003729//IPR022772//IPR024053 - Bifunctional nuclease domain // von Hippel-Lindau disease tumour suppressor, beta/alpha domain // von Hippel-Lindau disease tumour suppressor, beta domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGACCGAATCCGTGCCTTACTGACTTGCGTCAGTTGCGTGCATGTCACG
Internal bar code:TAAGTCTAAGACCTAAAGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4243
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CGACAGTCCATCCCATCGAG
Suggested primer 2:GTCCAGATCTCTCGCACTCG