Gene: Cre03.g177450
Overview
| Common name: | |
| Defline: | (1 of 1) IPR003729//IPR022772//IPR024053 - Bifunctional nuclease domain // von Hippel-Lindau disease tumour suppressor, beta/alpha domain // von Hippel-Lindau disease tumour suppressor, beta domain |
| Description: | |
| Synonyms: | g3668.t1 |
| Chromosome: | chromosome 3 |
Protein Localization
A plasmid for expressing Cre03.g177450 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre03.g177450-Venus-3xFLAG
Imaged strain: CSI_LW07C9
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001189_1 | CLIP2.001189 | 5'UTR | 80 | 6.1 |
| CLIP2.001763_1 | CLIP2.001763 | 3'UTR | 80 | 6.1 |
| CLIP2.001972_1 | CLIP2.001972 | CDS | 80 | 6.1 |
| CLIP2.001972_2 | CLIP2.001972 | CDS | 80 | 6.1 |
| CLIP2.003198_1 | CLIP2.003198 | CDS | 80 | 6.1 |
| CLIP2.003198_2 | CLIP2.003198 | CDS | 80 | 6.1 |
| CLIP2.004988_1 | CLIP2.004988 | 3'UTR | 80 | 6.1 |
| CLIP2.004988_2 | CLIP2.004988 | 3'UTR | 80 | 6.1 |
| CLIP2.005636_1 | CLIP2.005636 | 5'UTR | 80 | 6.1 |
| CLIP2.007211_1 | CLIP2.007211 | CDS | 80 | 6.1 |
| CLIP2.007211_2 | CLIP2.007211 | CDS | 80 | 6.1 |
| LMJ.RY0402.092264_1 | LMJ.RY0402.092264 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.157530_1 | LMJ.RY0402.157530 | intron | 58 | 5.5 |
| LMJ.RY0402.157530_2 | LMJ.RY0402.157530 | intron | 58 | 5.5 |
| LMJ.RY0402.172083_1 | LMJ.RY0402.172083 | intron | 73 | 5.5 |
| LMJ.RY0402.214522_1 | LMJ.RY0402.214522 | CDS | 73 | 5.5 |
| LMJ.RY0402.246944_1 | LMJ.RY0402.246944 | 3'UTR | 73 | 5.5 |
Gene Annotations
| PFAM: | PF01847, PF02577 |
| PANTHER: | PTHR15160 PTHR15160:SF4 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | GO:0004518 |
| Best arabidopsis TAIR name: | |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.