Insertion junction: CLIP2.004988_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004988
Chromosome:chromosome 3
Location:4711639
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g177450 (1 of 1) IPR003729//IPR022772//IPR024053 - Bifunctional nuclease domain // von Hippel-Lindau disease tumour suppressor, beta/alpha domain // von Hippel-Lindau disease tumour suppressor, beta domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATTCGCCTTGGTGTCTTCGACTCTTCGTCTGCCCTCCCTCCCAGCAAC
Internal bar code:GTTCAGACTAGGCACCCCATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:6374
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:102

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGTTTGGTGCGTTTGAT
Suggested primer 2:GTGCTCGTCAACAGGAGTCA