Insertion junction: LMJ.RY0402.092264_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.092264
Chromosome:chromosome 3
Location:4659191
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g177450 (1 of 1) IPR003729//IPR022772//IPR024053 - Bifunctional nuclease domain // von Hippel-Lindau disease tumour suppressor, beta/alpha domain // von Hippel-Lindau disease tumour suppressor, beta domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAAAGCTGCACCACACCTAAGCATACCA
Internal bar code:CAGACATCGCACACTGAACCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:564
LEAP-Seq percent confirming:70.2381
LEAP-Seq n confirming:590
LEAP-Seq n nonconfirming:250
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTTCTACTCGCGCATCGT
Suggested primer 2:TACAGTGGTGTTGGATGCGT