Insertion junction: CLIP2.003198_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.003198
Chromosome:chromosome 3
Location:4708387
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g177450 (1 of 1) IPR003729//IPR022772//IPR024053 - Bifunctional nuclease domain // von Hippel-Lindau disease tumour suppressor, beta/alpha domain // von Hippel-Lindau disease tumour suppressor, beta domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAGATGCATCCTGCCCTCTTCTCGCAATGCCTTGGTCACGCCGCACGG
Internal bar code:GTTTACTCACCAAGTTAGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1533
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACCAGAGCACGTAG
Suggested primer 2:GCCGCTAAATGCACCATCAG