Insertion junction: LMJ.RY0402.157530_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.157530
Chromosome:chromosome 3
Location:4657008
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g177450 (1 of 1) IPR003729//IPR022772//IPR024053 - Bifunctional nuclease domain // von Hippel-Lindau disease tumour suppressor, beta/alpha domain // von Hippel-Lindau disease tumour suppressor, beta domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCTCTTTGGCTCGTGAGTCCGACCACTG
Internal bar code:TTTGATACGGGGGGAGGTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:72
LEAP-Seq percent confirming:99.7081
LEAP-Seq n confirming:5123
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAGCAACCACAATACCCG
Suggested primer 2:CACTTCCTGAGTCCTCTGCC