Insertion junction: CLIP2.001191_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001191
Chromosome:chromosome 12
Location:1268161
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g489700 OTC1 Ornithine carbamoyltransferase; (1 of 1) 2.1.3.3 - Ornithine carbamoyltransferase / OTCase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGTTGCCGCTAGCTGCCGCCGGCCCTGCCGCATCAACCCGCACACAC
Internal bar code:TGTCATACAGGAGAGAATCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2940
LEAP-Seq percent confirming:78.0952
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:105

Suggested primers for confirmation by PCR

Suggested primer 1:TATGATTGTCCGCCCATCCG
Suggested primer 2:ACAAGGAGCGTGGGTATGTG