Gene: Cre12.g489700
Overview
| Common name: | OTC1 |
| Defline: | Ornithine carbamoyltransferase; (1 of 1) 2.1.3.3 - Ornithine carbamoyltransferase / OTCase |
| Description: | Ornithine carbamoyltransferase (OTC) (ARG3 in yeast); chloroplast-targeted; arg4 (LG-XII/XIII) is probably a mutant in this gene; note however that arg4 is not rescued by citrulline, whereas an OTC mutant should |
| Synonyms: | OTC1,Cre12.g489700.t1.1,g12191.t1 |
| Chromosome: | chromosome 12 |
Protein Localization
A plasmid for expressing Cre12.g489700 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g489700-Venus-3xFLAG
Imaged strain: CSI_LW06H7
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001191_1 | CLIP2.001191 | 3'UTR | 80 | 6.1 |
| CLIP2.001191_2 | CLIP2.001191 | 3'UTR | 80 | 6.1 |
| CLIP2.003675_1 | CLIP2.003675 | 3'UTR | 80 | 6.1 |
| CLIP2.003675_2 | CLIP2.003675 | 3'UTR | 80 | 6.1 |
| CLIP2.005220_1 | CLIP2.005220 | 3'UTR | 80 | 6.1 |
| CLIP2.005220_2 | CLIP2.005220 | 3'UTR | 80 | 6.1 |
| CLIP2.006514_3 | CLIP2.006514 | 3'UTR | 80 | 6.1 |
| CLIP2.006514_4 | CLIP2.006514 | 3'UTR | 80 | 6.1 |
| CLIP2.007006_1 | CLIP2.007006 | 3'UTR | 80 | 6.1 |
| CLIP2.007006_2 | CLIP2.007006 | 3'UTR | 80 | 6.1 |
| CLIP2.043986_1 | CLIP2.043986 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.200815_1 | LMJ.RY0402.200815 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.200815_2 | LMJ.RY0402.200815 | 3'UTR | 95 | 5.5 |
Gene Annotations
| PFAM: | PF00185, PF02729 |
| PANTHER: | PTHR11405 PTHR11405:SF1 |
| KEGG_ec: | EC:2.1.3.3 |
| KEGG_orthology: | K00611 |
| KOG: | KOG1504 |
| Gene ontology terms:: | GO:0004070, GO:0006207, GO:0006520, GO:0016597, GO:0016743 |
| Best arabidopsis TAIR name: | AT1G75330 |
| Best arabidopsis TAIR symbol: | OTC |
| Best arabidopsis TAIR defline: | ornithine carbamoyltransferase |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.