Insertion junction: CLIP2.005220_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.005220
Chromosome:chromosome 12
Location:1268407
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g489700 OTC1 Ornithine carbamoyltransferase; (1 of 1) 2.1.3.3 - Ornithine carbamoyltransferase / OTCase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTTGGGGTTGGGTTATTGCAGACCGAGATTGGACGGCGGCAAACCTGA
Internal bar code:CCAGAGTGCCGGTTACATTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2476
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:TATGATTGTCCGCCCATCCG
Suggested primer 2:TGGCTTCAGGAGATGGAGGA