Insertion junction: CLIP2.005220_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005220
Chromosome:chromosome 12
Location:1268398
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g489700 OTC1 Ornithine carbamoyltransferase; (1 of 1) 2.1.3.3 - Ornithine carbamoyltransferase / OTCase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCAACCCATCCCGCCATCCTGGCAGCTTATTCGCTCATACGCAGTATG
Internal bar code:CTCAACTGGCTAGGTTGGTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2050
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCTTCAGGAGATGGAGGA
Suggested primer 2:TATGATTGTCCGCCCATCCG